Information for 7-CATAAAGGCG (Motif 25)

G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G
Reverse Opposite:
G T A C C T A G A G T C G T A C A G C T A C G T A C G T C G T A A C G T C T A G
p-value:1e-7
log p-value:-1.709e+01
Information Content per bp:1.868
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif21.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.7 +/- 24.1bp
Average Position of motif in Background57.8 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CATAAAGGCG
NGYCATAAAWCH-
 A C G T A C G T A C G T G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

CDX1/MA0878.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATAAAGGCG
GCAATAAAA---
 A C G T A C G T G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CATAAAGGCG
AAGCCATAAAA---
 A C G T A C G T A C G T A C G T G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CATAAAGGCG---
--TAATGGCGGNC
 G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CATAAAGGCG----
GTATAAAAGGCGGGG
 A C G T G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CATAAAGGCG----
GTATAAAAGGCGGGG
 A C G T G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATAAAGGCG
GTCATAAAAN--
 A C G T A C G T G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CATAAAGGCG
AACAAAGG--
 G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CATAAAGGCG-------
--CAAAGGCGTGGCCAG
 G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATAAAGGCG
GCTAATTGCT
 G A T C C G T A A C G T C G T A C G T A C T G A A C T G A C T G A G T C C A T G
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T