Information for 12-CATTTGASTGGGACTT (Motif 19)

A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T
Reverse Opposite:
C G T A C G T A T C A G A G C T T A G C G T A C G T A C C G T A A T C G G C A T A G T C C G T A C G T A C G T A C A G T C T A G
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.708
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif34.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.2 +/- 16.7bp
Average Position of motif in Background46.3 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATTTGASTGGGACTT
-CTTTCANTATGACTV
 A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T
A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CATTTGASTGGGACTT-
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CATTTGASTGGGACTT-
NAGTTTCABTHTGACTNW
 A C G T A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CATTTGASTGGGACTT-----
-----NNATTGGACTTTNGNN
 A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CATTTGASTGGGACTT
ANTCCTTTGTCTNNNN---
 A C G T A C G T A C G T A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CATTTGASTGGGACTT
-ATTTGAATT------
 A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CATTTGASTGGGACTT
CCTTTGTTTT------
 A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CATTTGASTGGGACTT
ACTTTCACTTTC----
 A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CATTTGASTGGGACTT-
-TGCGGAGTGGGACTGG
 A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T A C G T
A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CATTTGASTGGGACTT
----TGTCTGDCACCT
 A G T C G T C A A C G T C G A T A C G T T A C G C G T A T A G C A C G T A C T G A C T G A C T G C T G A A G T C A C G T C G A T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T