Information for 10-AAGGWACTTCTTAAGG (Motif 12)

G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C C G A T G A C T C G T A C T G A A C T G C T G A C G T A C A T G A C G T G C A T T A G C G T A C A C G T A C G T
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.720
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.7 +/- 23.7bp
Average Position of motif in Background55.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AAGGWACTTCTTAAGG-
-----WTGSCCTSAGGS
 G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:2
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AAGGWACTTCTTAAGG-------
------NTNNTTAAGTGGNTNAN
 G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AAGGWACTTCTTAAGG-
-----ATGCCCTGAGGC
 G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AAGGWACTTCTTAAGG
--GTTAATNATTAA--
 G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G
A C G T A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.52
Offset:10
Orientation:forward strand
Alignment:AAGGWACTTCTTAAGG--
----------CTAATKGV
 G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AAGGWACTTCTTAAGG-------
------NTNNTTAAGTGGTTANN
 G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AAGGWACTTCTTAAGG----
-----ATTGCCTGAGGCGAA
 G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AAGGWACTTCTTAAGG
CNTTAAGTACTTAANG
 G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:AAGGWACTTCTTAAGG---
----------TTAAGTGGN
 G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AAGGWACTTCTTAAGG----
-----ATTCCCTGAGGGGAA
 G T C A T G C A A C T G A T C G C G T A G T C A G T A C C G A T G A C T G T A C A G C T A C G T C T G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A