Information for 1-BTTTAYKGGY (Motif 2)

A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C
Reverse Opposite:
C T A G A T G C G A T C G T C A C T G A G A C T G T C A C G T A C G T A T C G A
p-value:1e-18
log p-value:-4.273e+01
Information Content per bp:1.619
Number of Target Sequences with motif91.0
Percentage of Target Sequences with motif10.44%
Number of Background Sequences with motif1717.7
Percentage of Background Sequences with motif3.57%
Average Position of motif in Targets51.6 +/- 25.4bp
Average Position of motif in Background50.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--BTTTAYKGGY
DGWTTTATGRCN
 A C G T A C G T A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:BTTTAYKGGY
TTTTATTRGN
 A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-BTTTAYKGGY
TTTTTATTGG-
 A C G T A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-BTTTAYKGGY
NTTTTATTGG-
 A C G T A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-BTTTAYKGGY
NTTTTATTGG-
 A C G T A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.87
Offset:0
Orientation:forward strand
Alignment:BTTTAYKGGY
TTTTATKRGG
 A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:BTTTAYKGGY
TTTTATTGC-
 A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:BTTTAYKGGY-
TTTTATGGCTN
 A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----BTTTAYKGGY--
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-BTTTAYKGGY
NTTTTATTACN
 A C G T A G C T C G A T A C G T A C G T C T G A G A C T C A G T C T A G A T C G G A T C
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C