Information for 9-AGTCTGGGCA (Motif 16)

G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A
Reverse Opposite:
C A G T A C T G A G T C A G T C A G T C C G T A T C A G T G C A A G T C C A G T
p-value:1e-7
log p-value:-1.824e+01
Information Content per bp:1.827
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.53%
Number of Background Sequences with motif266.1
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets52.4 +/- 24.8bp
Average Position of motif in Background49.0 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:AGTCTGGGCA
WDNCTGGGCA
 G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGGGCA
TWGTCTGV---
 A C G T G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGGGCA
CTGTCTGG---
 A C G T G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGTCTGGGCA
VBSYGTCTGG---
 A C G T A C G T A C G T G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGTCTGGGCA-
--NGTGGGCAT
 G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTGGGCA-----
NNNNTTGGGCACNNCN
 A C G T G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCTGGGCA--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGTCTGGGCA-
--TNNGGGCAG
 G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTCTGGGCA
CGTCTAGACA
 G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTGGGCA------
NNGTATGTGCACATNNN
 A C G T G T C A A C T G A C G T A G T C A C G T A C T G T C A G C T A G T G A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G