Information for 1-TAATTACCMTCTTCTT (Motif 5)

A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
Reverse Opposite:
C T G A C T G A A C T G C G T A C T G A C T A G C G T A C A G T C T A G T A C G A G C T C G T A C G T A A C G T C G A T T C G A
p-value:1e-12
log p-value:-2.944e+01
Information Content per bp:1.738
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.9 +/- 25.6bp
Average Position of motif in Background42.8 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0052.1_Hoxa5/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TAATTACCMTCTTCTT
NTGAGCTAATTACCNT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
G A T C G C A T C A T G C G T A C T A G A T G C G A C T G T C A G T C A A C G T A C G T C T G A T G A C G A T C A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAATTACCMTCTTCTT
CTAATTTGCATATT---
 A C G T A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T A C G T A C G T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TAATTACCMTCTTCTT
NTGAGCTAATTACCNT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
G C T A G C A T C A T G C T G A C T A G A T G C G A C T T G C A G T C A A C G T A C G T C T G A T A G C G A T C A C G T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TAATTACCMTCTTCTT
TCGCGATAATTACCGAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C A C G T A C G T A C G T A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TAATTACCMTCTTCTT
GCGCTATAATTACCGAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C A C G T A C G T A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAATTACCMTCTTCTT
AAATTAGCATAAT---
 A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T A C G T

Hoxb5/MA0904.1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TAATTACCMTCTTCTT
ATGNGCTAATTANCNT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0060.1_Hoxb5/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TAATTACCMTCTTCTT
ATGNGCTAATTANCNT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAATTACCMTCTTCTT
TAATTGGT--------
 A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TAATTACCMTCTTCTT
NTNAGGTAATTACCTT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A T C G A C G A T A C G T C T G A A T G C G A T C G T C A C G A T G A T C A G C T A C G T T G A C A G C T A G C T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T