Information for 5-CTCAGACCAC (Motif 9)

A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C
Reverse Opposite:
A T C G C G A T A C T G T C A G A G C T T G A C C G A T A C T G C T G A C T A G
p-value:1e-8
log p-value:-2.071e+01
Information Content per bp:1.742
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif7.91%
Number of Background Sequences with motif287.6
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets54.0 +/- 32.6bp
Average Position of motif in Background50.7 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTCAGACCAC
CNGTCACGCCAC
 A C G T A C G T A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCAGACCAC
ATCACCCCAT
 A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTCAGACCAC-
TGACCTCTGACCCCN
 A C G T A C G T A C G T A C G T A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCAGACCAC
ATCACCCCAC
 A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCAGACCAC------
CATAAGACCACCATTAC
 A C G T A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCAGACCAC--
--NAAACCACAG
 A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C A C G T A C G T
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCAGACCAC----
--NWAACCACADNN
 A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGACCAC-
GCTCCGCCCMCY
 A C G T A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCAGACCAC
ATCACCCCAT
 A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTCAGACCAC
TGACCTTTGACCTC
 A C G T A C G T A C G T A C G T A G T C G A C T A G T C C G T A A C T G T C G A A G T C A G T C C G T A A T G C
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C