Information for 1-WGACACACTGACTAAG (Motif 1)

C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G
Reverse Opposite:
A G T C A C G T A G C T T C G A A T C G G C A T A G T C C G T A C T A G A G C T A C T G A G C T A C T G A G C T A T G C C G T A
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.670
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.5 +/- 25.5bp
Average Position of motif in Background54.9 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:WGACACACTGACTAAG
TGACCCAGTGACCTAC
 C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:WGACACACTGACTAAG
--AAGCACTTAA----
 C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----WGACACACTGACTAAG
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:WGACACACTGACTAAG-
-CAATCACTGGCAGAAT
 C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:WGACACACTGACTAAG
-AAAATGCTGACT---
 C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G
A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-WGACACACTGACTAAG
CTCACACAATGGCGC--
 A C G T C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--WGACACACTGACTAAG
NAGGTCACNNTGACC---
 A C G T A C G T C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:WGACACACTGACTAAG-
AAATTTGCTGACTTAGA
 C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

POL002.1_INR/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:WGACACACTGACTAAG
---NNNANTGA-----
 C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--WGACACACTGACTAAG
NATGAGTCACC-------
 A C G T A C G T C G A T A T C G C T G A T G A C C T G A T G A C T C G A G A T C C G A T C T A G C G T A A T G C A G C T C T G A T C G A T A C G
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T