Information for 3-CGGCGAAAGCTGG (Motif 4)

A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G
Reverse Opposite:
A G T C A G T C C T G A A C T G A T G C C G A T A C G T A C G T A G T C A C T G A G T C A G T C C T A G
p-value:1e-13
log p-value:-3.036e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.3 +/- 15.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGCGAAAGCTGG-
-NGNGACAGCTGCN
 A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGCGAAAGCTGG
---NAACAGCTGG
 A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G
A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGGCGAAAGCTGG--
----GACAGCTGCAG
 A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGGCGAAAGCTGG--
----AACAGCTGCAG
 A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------CGGCGAAAGCTGG
NNTTTANNCGACGNA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

CENPB/MA0637.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGGCGAAAGCTGG
TTCGTNNNANGCGGG
 A C G T A C G T A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CGGCGAAAGCTGG
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGAAAGCTGG
NNNNGGGGGAAGANGG
 A C G T A C G T A C G T A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGGCGAAAGCTGG
----AACAGCTG-
 A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGGCGAAAGCTGG-
--VNAVCAGCTGGC
 A G T C A C T G C T A G A G T C A C T G G T C A G T C A C G T A A T C G A G T C A G C T A C T G A C T G A C G T
A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C