Information for 3-GTCTATAAGAACCATG (Motif 3)

A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G
Reverse Opposite:
G T A C C G T A A G C T A C T G A C T G A C G T A C G T A T G C C G A T A C G T C G T A C A G T C G T A A T C G C G T A A T G C
p-value:1e-14
log p-value:-3.251e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.7 +/- 16.6bp
Average Position of motif in Background34.2 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTCTATAAGAACCATG-
---NTTNAGAACAATTA
 A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G A C G T
A C G T A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTCTATAAGAACCATG----
----TTAAGAACAATAAATT
 A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTCTATAAGAACCATG---
---NNTNANAACAATTNNA
 A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTCTATAAGAACCATG----
----TTTAGAACAATAAAAT
 A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTCTATAAGAACCATG
--AAATAAGAAAAAAC
 A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G
A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTCTATAAGAACCATG-
--GTATAAAAGGCGGGG
 A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GTCTATAAGAACCATG-----
----ATAAGAACAAAGGACTA
 A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTCTATAAGAACCATG-
--GTATAAAAGGCGGGG
 A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GTCTATAAGAACCATG-
-------VRAACAATGG
 A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GTCTATAAGAACCATG-
-------AAAACAATGG
 A T C G A C G T A T G C C G A T G C T A A C G T C G T A C G T A A T C G C G T A C G T A G T A C G T A C C T G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G