Information for 5-GAAAGTAGTA (Motif 26)

A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A
Reverse Opposite:
A C G T C G T A A T G C A C G T C G T A A G T C A C G T A C G T A C G T A G T C
p-value:1e-5
log p-value:-1.301e+01
Information Content per bp:1.961
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets79.6 +/- 3.2bp
Average Position of motif in Background37.3 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GAAAGTAGTA---
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GAAAGTAGTA
GAAAGTGAAAGT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------GAAAGTAGTA
AGAAAGTGAAAGTGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAAAGTAGTA
ACTGAAACCA---
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GAAAGTAGTA
AGAAACGAAAGT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGTAGTA-----
TTCNAAGTACTTNNNNN
 A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0155.1_Osr2_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAAAGTAGTA---
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

ETV6/MA0645.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAAAGTAGTA
AGCGGAAGTG---
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAAAGTAGTA-----
TACTAAGTACTTAAATG
 A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAAAGTAGTA---
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A T C G A C G T C G T A A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A