Information for 15-GCTGTGADAGACT (Motif 25)

T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T
Reverse Opposite:
C G T A A T C G C G A T G A T C A C G T G C T A C A G T T A G C C G T A A G T C C G T A C T A G A G T C
p-value:1e-6
log p-value:-1.392e+01
Information Content per bp:1.693
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif37.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets51.3 +/- 31.3bp
Average Position of motif in Background46.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGTGADAGACT
GCTGTG-------
 T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGADAGACT
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGADAGACT
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTGTGADAGACT
GCTGTCAA-----
 T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGADAGACT
AGGACGCTGTAAAGGGA-
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGTGADAGACT
NNNCAGCTGTCAATATN-
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTGTGADAGACT
-AGGTGHCAGACA
 T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTGTGADAGACT
CCTTTTATAGNC-
 T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTGTGADAGACT-
-AGGTGNCAGACAG
 T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGADAGACT
AACTAGCTGTCAATAC--
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G A T A C T G C G A T A C T G G C T A C A G T C G T A C T A G C G T A A T G C G A C T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T A C G T