Information for 4-CTGCTAAGGA (Motif 24)

A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A
Reverse Opposite:
A G C T A G T C A G T C A C G T A C G T C T G A A C T G A T G C C G T A A C T G
p-value:1e-7
log p-value:-1.632e+01
Information Content per bp:1.911
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif39.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets63.5 +/- 30.0bp
Average Position of motif in Background46.5 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CTGCTAAGGA---
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGCTAAGGA-
-TTCTNMGGAA
 A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A A C G T
A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------CTGCTAAGGA-----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTAAGGA-
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGCTAAGGA
CAGATAAGGN
 A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGCTAAGGA
GGTGCCAAGT-
 A C G T A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGCTAAGGA
NAGATAAGNN
 A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGCTAAGGA-
-NNATAAGGNN
 A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A A C G T
A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGCTAAGGA
TTGCCAAG--
 A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTAAGGA
CCCCCTGCTGTG--
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A G T C A G C T G T C A C G T A A C T G A C T G C T G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T