Information for 14-AWTWMCCYTGCTA (Motif 23)

C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C C G T A C T A G A C T G A C T G A C T G C G A T C G T A C G T A A C G T
p-value:1e-7
log p-value:-1.770e+01
Information Content per bp:1.876
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 11.8bp
Average Position of motif in Background83.8 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AWTWMCCYTGCTA--
---CCCCCTGCTGTG
 C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AWTWMCCYTGCTA-----
---NCCGTTGCTANGNGN
 C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AWTWMCCYTGCTA
BNTGDCCTTG---
 C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AWTWMCCYTGCTA-----
---NNCGTTGCTATGGNN
 C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AWTWMCCYTGCTA
-TTCCCCCTAC--
 C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A
A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AWTWMCCYTGCTA
AACAATAACATTGTT-
 A C G T A C G T A C G T C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AWTWMCCYTGCTA---------
NTNNNNNGTTGCTANGGNNCANA
 A C G T C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AWTWMCCYTGCTA
NATGACCTTGA--
 C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AWTWMCCYTGCTA
-ATGACCTTGA--
 C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AWTWMCCYTGCTA-----
---TCNCCTGCTGNGNNN
 C G T A C G A T A C G T C G T A G T A C A G T C G T A C A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G