Information for 12-AAKRGTAAWAACW (Motif 21)

C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T
Reverse Opposite:
C G T A A C T G C G A T A C G T C G T A A C G T A C G T C G T A A G T C A G C T G T A C A C G T A G C T
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets67.2 +/- 26.8bp
Average Position of motif in Background48.3 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0061.1_Hoxb6/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAKRGTAAWAACW--
TATTGGTAATTACCTT
 A C G T C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAKRGTAAWAACW---
AAAGGTAATAAAATTT
 C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAKRGTAAWAACW
-AGGGTAACAGC-
 C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T
A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAKRGTAAWAACW----
-ACNNTAATTACNNCAN
 C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T A C G T A C G T A C G T A C G T
A C G T T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAKRGTAAWAACW-
CAAAAGTAAACAAAG
 A C G T C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAKRGTAAWAACW-----
---AAAAATAACAAACGG
 C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

FOXF2/MA0030.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAKRGTAAWAACW
CAAACGTAAACAAT
 A C G T C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

FOXI1/MA0042.2/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAKRGTAAWAACW
----GTAAACA--
 C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T
A C G T A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAKRGTAAWAACW----
-AAGGTAATTACCTAAT
 C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T A C G T A C G T A C G T A C G T
A C G T T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAKRGTAAWAACW
-AAAGTAAACA--
 C T G A C G T A A C T G C T G A A C T G C G A T C G T A C G T A C G A T C G T A C G T A A G T C C G A T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T