Information for 2-TTATACTCCMCATTTG (Motif 2)

A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G
Reverse Opposite:
G T A C C G T A C G T A G T C A C G A T A C T G C A T G C A T G A C T G C G T A C T A G C G A T C G T A C G A T C G T A G T C A
p-value:1e-16
log p-value:-3.727e+01
Information Content per bp:1.688
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 21.0bp
Average Position of motif in Background61.1 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIC/MA0687.1/Jaspar

Match Rank:1
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTATACTCCMCATTTG-
---TACTTCCTCTTTTN
 A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G A C G T
A C G T A C G T A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TTATACTCCMCATTTG
TAAGATTATAATACGG-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G A C G T A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTATACTCCMCATTTG-
---TACTTCCGCTTTTT
 A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G A C G T
A C G T A C G T A C G T G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TTATACTCCMCATTTG
NANTATTATAATTNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A A C G T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:5
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:TTATACTCCMCATTTG-
-AACACTGCACATTGTT
 A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G A C G T
A C G T C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.47
Offset:-9
Orientation:reverse strand
Alignment:---------TTATACTCCMCATTTG
NNNNNNCTTTTATAN----------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:7
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-TTATACTCCMCATTTG-
YTAATTRAWWCCAGATGT
 A C G T A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.47
Offset:-9
Orientation:reverse strand
Alignment:---------TTATACTCCMCATTTG
NNNNNNCTTTTATAN----------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:9
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:TTATACTCCMCATTTG----
----ACNNCTAATTAGNNNN
 A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.46
Offset:-4
Orientation:reverse strand
Alignment:----TTATACTCCMCATTTG
TNAATTTTATTACCTN----
 A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G A T G C T A A G T C C G A T T G A C G T A C G T A C T G A C G C T A C A G T A C G T C G A T A C T G
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A A C G T A C G T A C G T A C G T