Information for 7-TRARAACASTGTM (Motif 14)

A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C
Reverse Opposite:
A C T G C G T A A G T C C G T A A T G C A C G T A C T G A C G T A C G T G A T C A C G T A G T C C G T A
p-value:1e-9
log p-value:-2.294e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.4 +/- 9.6bp
Average Position of motif in Background56.6 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TRARAACASTGTM
NTTNAGAACAATTA-
 A C G T A C G T A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TRARAACASTGTM-
NNTNANAACAATTNNA
 A C G T A C G T A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TRARAACASTGTM--
TWGHWACAWTGTWDC
 A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TRARAACASTGTM--
TTAAGAACAATAAATT
 A C G T A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TRARAACASTGTM
--AAAACAATGG-
 A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TRARAACASTGTM
--VRAACAATGG-
 A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TRARAACASTGTM
---NAACAAT---
 A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TRARAACASTGTM--
YDGHTACAWTGTADC
 A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TRARAACASTGTM--
TTTAGAACAATAAAAT
 A C G T A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TRARAACASTGTM
TATCATTAGAACGCT---
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T A G C G T A C G T A A G T C C G T A A T C G A C G T A C T G C G A T G T A C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T