Information for 1-GTTGTCAGAT (Motif 13)

C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T
Reverse Opposite:
C T G A A C G T G T A C A G C T A T C G C G T A G T A C C G T A C T G A G A T C
p-value:1e-10
log p-value:-2.378e+01
Information Content per bp:1.843
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif173.0
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets41.7 +/- 26.1bp
Average Position of motif in Background49.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GTTGTCAGAT
--TGTCANYT
 C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTTGTCAGAT
-NTGTCAN--
 C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GTTGTCAGAT
-YTGWCADY-
 C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T
A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTTGTCAGAT
VBTGWCAGCB
 C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTTGTCAGAT
GCTGTCAA--
 C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTTGTCAGAT
CCTGTCAA--
 C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGTCAGAT--
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C G T C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGTCAGAT
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C G T A C G T C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGTCAGAT--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTGTCAGAT----
GTATTGACAGCTNNTT
 A C G T A C G T C T A G G A C T A C G T A C T G A C G T A T G C C T G A C A T G G T C A A G C T A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T