Information for 7-GKKGAGTKKGGGRAGA (Motif 12)

A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A
Reverse Opposite:
A G C T A G T C A G C T A G C T G A T C G A T C G T A C T G C A G T A C C G T A T A G C C G A T A T G C G T A C T G C A T G A C
p-value:1e-10
log p-value:-2.423e+01
Information Content per bp:1.585
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif6.56%
Number of Background Sequences with motif985.6
Percentage of Background Sequences with motif2.01%
Average Position of motif in Targets52.2 +/- 24.9bp
Average Position of motif in Background51.1 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:GKKGAGTKKGGGRAGA
----------NGAAGC
 A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GKKGAGTKKGGGRAGA---
---NNNNGGGGGAAGANGG
 A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GKKGAGTKKGGGRAGA
---------TGGAAAA
 A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GKKGAGTKKGGGRAGA
--------TGGGGA--
 A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.49
Offset:9
Orientation:forward strand
Alignment:GKKGAGTKKGGGRAGA---
---------TGGAACAGMA
 A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:GKKGAGTKKGGGRAGA
------CSTGGGAAAD
 A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GKKGAGTKKGGGRAGA
BTBRAGTGSN------
 A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GKKGAGTKKGGGRAGA
CTYRAGTGSY------
 A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GKKGAGTKKGGGRAGA-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.48
Offset:7
Orientation:forward strand
Alignment:GKKGAGTKKGGGRAGA-
-------CCAGGAACAG
 A C T G A C G T C A T G T A C G C G T A A C T G C G A T C A T G A C G T C A T G C T A G C T A G T C G A C T G A T C A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G