Information for 1-SYAAAACAGAAMASKW (Motif 1)

A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
Reverse Opposite:
C G A T G T C A A T G C A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T C T A G A T G C
p-value:1e-16
log p-value:-3.878e+01
Information Content per bp:1.855
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.9 +/- 26.6bp
Average Position of motif in Background33.2 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:SYAAAACAGAAMASKW
GCAAAACATTACTA--
 A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---SYAAAACAGAAMASKW
ATATCAAAACAAAACA---
 A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----SYAAAACAGAAMASKW
AACACCAAAACAAAGGA---
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----SYAAAACAGAAMASKW
ATGCTAAAAATAGAA-----
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:SYAAAACAGAAMASKW
--GAAAMTGAAACT--
 A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:SYAAAACAGAAMASKW
-CAAACAACAACACCT
 A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:SYAAAACAGAAMASKW
--GAAASYGAAASY--
 A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----SYAAAACAGAAMASKW
CAAAAGTAAACAAAG-----
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SYAAAACAGAAMASKW
GTTAAAAAAAAAAATTA
 A C G T A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:SYAAAACAGAAMASKW
--GAAACTGAAACT--
 A T C G A G T C C G T A C G T A C G T A C G T A G T A C C G T A A C T G C G T A C G T A G T A C C G T A A T C G A C G T C G T A
A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T