Information for 18-AGCTAGCTAG (Motif 19)

C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G
Reverse Opposite:
A G T C A C G T C T G A A T C G A G T C A G C T C G T A C T A G A G T C A C G T
p-value:1e-5
log p-value:-1.158e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif23.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.8 +/- 22.6bp
Average Position of motif in Background66.6 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCTAGCTAG----
GAAAACTAGTTAACATC
 A C G T A C G T A C G T C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCTAGCTAG----
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AGCTAGCTAG-
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCTAGCTAG-
-GTTAACTAGN
 C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G A C G T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGCTAGCTAG---
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGCTAGCTAG-
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCTAGCTAG
CAGCC------
 A C G T C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCTAGCTAG-----
AAAGCTAATTAGCGAAA
 A C G T A C G T C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

PH0154.1_Prrx1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGCTAGCTAG----
ANNAGTTAATTAGTTAN
 A C G T A C G T A C G T C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G A C G T A C G T A C G T A C G T
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

PH0167.1_Tcf1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGCTAGCTAG---
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G A T C T G A A C T G A T G C A G C T C G T A C T A G A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T