Information for 20-CTCAGGAGGGGGA (Motif 18)

A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C G T A C A G T C A G T C A G T C A C G T A G T C A T G C A C G T C T A G C T G A A C T G
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 31.3bp
Average Position of motif in Background51.5 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:CTCAGGAGGGGGA-
----GGAGGGGGAA
 A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTCAGGAGGGGGA
CACAGCAGGGGG-
 A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CTCAGGAGGGGGA
----GGGGGGGG-
 A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A
A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTCAGGAGGGGGA----
-TGCGGAGTGGGACTGG
 A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGGAGGGGGA-
DCHCAGCAGGRGGCC
 A C G T A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTCAGGAGGGGGA-
CACAGCGGGGGGTC
 A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGGAGGGGGA-
NCGCAGCGGGGGGTC
 A C G T A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGGAGGGGGA-
NCNCAGCGGGGGGTC
 A C G T A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.63
Offset:7
Orientation:forward strand
Alignment:CTCAGGAGGGGGA
-------TGGGGA
 A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCAGGAGGGGGA
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C A G C T A G T C C G T A A T C G A C T G G T C A A C T G A C T G A C T G A C T G A C T G C G T A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T