Information for 1-TTCCWTTTCA (Motif 3)

C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A
Reverse Opposite:
A G C T C A T G T G C A C T G A C T G A C G T A C T A G A C T G C T G A C G T A
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.725
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.57%
Number of Background Sequences with motif1113.1
Percentage of Background Sequences with motif2.34%
Average Position of motif in Targets46.3 +/- 27.7bp
Average Position of motif in Background50.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTCCWTTTCA
AACCTTATAT
 C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTCCWTTTCA
AGTTTCAKTTTC-
 A C G T A C G T A C G T C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCCWTTTCA
TTCCTCT---
 C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A
C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTCCWTTTCA
ATTTTCCATT---
 A C G T A C G T A C G T C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCCWTTTCA
ACTTTCACTTTC-
 A C G T A C G T A C G T C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

IRF7/MA0772.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCCWTTTCA-
ANTTTCGCTTTCGN
 A C G T A C G T A C G T C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTCCWTTTCA
ATTTTCCATT---
 A C G T A C G T A C G T C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTCCWTTTCA
ATTTTCCATT---
 A C G T A C G T A C G T C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTCCWTTTCA
RSTTTCRSTTTC-
 A C G T A C G T A C G T C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTCCWTTTCA
AGTTTCAGTTTC-
 A C G T A C G T A C G T C G A T G A C T A G T C A G T C G C A T A G C T A G C T A C G T G T A C T C G A
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T