Information for 5-ACGRCCCTGACCTGCC (Motif 20)

G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
Reverse Opposite:
C T A G C A T G T A G C C G T A C T A G A T C G C G A T A G T C G T C A C T A G A C T G A C T G A G C T T A G C A T C G A C G T
p-value:1e-6
log p-value:-1.479e+01
Information Content per bp:1.768
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 24.9bp
Average Position of motif in Background58.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACGRCCCTGACCTGCC
-TGACCTTGACCT---
 G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACGRCCCTGACCTGCC
-TGACCTTGACCT---
 G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:ACGRCCCTGACCTGCC
-------TGACCTYA-
 G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:ACGRCCCTGACCTGCC
-------TGACCT---
 G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACGRCCCTGACCTGCC
GGGGCCGAGGCCTG--
 G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ACGRCCCTGACCTGCC
------GTGACCTT--
 G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACGRCCCTGACCTGCC
AAGACCCYYN------
 G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACGRCCCTGACCTGCC
-CTGCCCGCA------
 G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:ACGRCCCTGACCTGCC
-------TGACCYCT-
 G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:ACGRCCCTGACCTGCC
------CTGACCTTTG
 G T C A A T G C A T C G T C G A G T A C A G T C A G T C A C G T A C T G G C T A A T G C A G T C A C G T A T C G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G