Information for 8-AGTCAGGGTC (Motif 17)

T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C
Reverse Opposite:
C T A G T G C A T A G C A G T C T A G C C A G T A C T G C G T A G T A C A G C T
p-value:1e-7
log p-value:-1.806e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif179.6
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets47.7 +/- 22.9bp
Average Position of motif in Background49.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGTCAGGGTC-
AGGTCAAGGTCA
 A C G T T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGTCAGGGTC--
-TTCAAGGTCAT
 T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGTCAGGGTC------
TATTCAAGGTCATGCGA
 A C G T T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGTCAGGGTC---
--TCAAGGTCATA
 T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C A C G T A C G T A C G T
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGTCAGGGTC-----
-GTCACGCTCNCTGA
 T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGTCAGGGTC-
-BTCAAGGTCA
 T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGTCAGGGTC--
--NRRGGGTCTT
 T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C A C G T A C G T
A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTCAGGGTC-
-NTCAAGGTCA
 T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGTCAGGGTC-
AGGTCAAGGTCA
 A C G T T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGTCAGGGTC--
--TCAAGGTCAT
 T C G A C A T G G C A T T G A C G T C A A T C G T C A G A T C G A C G T G A T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T