Information for 7-AATGGGCCGA (Motif 15)

C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C T G A G T C A T G C A G T C C T G A A C G T A C G T
p-value:1e-8
log p-value:-1.872e+01
Information Content per bp:1.925
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.4 +/- 27.9bp
Average Position of motif in Background51.4 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AATGGGCCGA
GGAGAAAGGTGCGA
 A C G T A C G T A C G T A C G T C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------AATGGGCCGA
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AATGGGCCGA
GTTAATGGCC---
 A C G T A C G T A C G T C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AATGGGCCGA-
-ATGGGGTGAT
 C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A A C G T
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AATGGGCCGA--
RGKGGGCGGAGC
 C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A A C G T A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AATGGGCCGA-
-ATGGGGTGAT
 C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AATGGGCCGA-
-GTGGGGTGAT
 C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A A C G T
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AATGGGCCGA
NTAATGAGCT--
 A C G T A C G T C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AATGGGCCGA
NTAATTGG----
 A C G T A C G T C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A
A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AATGGGCCGA
-CTAGGCCT-
 C G T A C G T A A G C T A C T G A T C G A C T G A G T C A G T C C T A G C G T A
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T