Information for 3-AAGCCAGCTGVAC (Motif 7)

C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
Reverse Opposite:
A C T G A C G T A C G T A G T C G T C A A C T G A G T C A C G T A C T G A T C G A T G C A C G T A C G T
p-value:1e-11
log p-value:-2.673e+01
Information Content per bp:1.865
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.7 +/- 25.1bp
Average Position of motif in Background70.9 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AAGCCAGCTGVAC
-NAHCAGCTGD--
 C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AAGCCAGCTGVAC
-NNACAGCTGC--
 C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAGCCAGCTGVAC
--GACAGCTGCAG
 C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGCCAGCTGVAC
NNVVCAGCTGBN-
 C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAGCCAGCTGVAC
--AACAGCTGCAG
 C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AAGCCAGCTGVAC
---NCAGCTGCTG
 C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCAGCTGVAC
NGNGACAGCTGCN-
 A C G T C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAGCCAGCTGVAC
-NNVCAGCTGB--
 C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAGCCAGCTGVAC
--ANCAGCTG---
 C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAGCCAGCTGVAC
-NAACAGCTGT--
 C G T A C G T A A T C G A T G C A G T C C G T A A C T G A G T C A C G T A C T G T C G A C G T A G T A C
A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T