Information for 6-TGACACCGCTGTC (Motif 13)

C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A T A C G G T A C A C T G A T C G A C G T A C T G A C G T A G T C G T C A
p-value:1e-9
log p-value:-2.123e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 18.1bp
Average Position of motif in Background59.8 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGACACCGCTGTC--
-------GCTGTCAA
 C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGACACCGCTGTC--
-------CCTGTCAA
 C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:TGACACCGCTGTC--
--------NTGTCAN
 C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGACACCGCTGTC------
--NNNCAGCTGTCAATATN
 C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TGACACCGCTGTC
ATAAATGACACCTATCA-
 A C G T A C G T A C G T A C G T A C G T C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGACACCGCTGTC------
--AAGACGCTGTAAAGCGA
 C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGACACCGCTGTC------
--AAGACGCTGTAAAGCGA
 C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGACACCGCTGTC------
--AGGACGCTGTAAAGGGA
 C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGACACCGCTGTC
ARNTGACA--------
 A C G T A C G T A C G T C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGACACCGCTGTC
AGGVNCCTTTGT-
 C A G T A C T G G T C A A G T C C G T A T A G C G T A C A C T G A G T C A C G T A C T G A C G T A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T