Information for 7-GCCCCCMYCTGCTGGC (Motif 19)

A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C
Reverse Opposite:
A T C G A G T C A G T C C G T A A T C G G A T C G T C A A C T G T C A G A C T G A C T G C T A G A T C G C T A G A T C G G T A C
p-value:1e-9
log p-value:-2.084e+01
Information Content per bp:1.720
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif56.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets53.2 +/- 23.2bp
Average Position of motif in Background46.1 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----GCCCCCMYCTGCTGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCCMYCTGCTGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GCCCCCMYCTGCTGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GCCCCCMYCTGCTGGC
----CCCCCTGCTGTG
 A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCCCCCMYCTGCTGGC-
--GGCCYCCTGCTGDGH
 A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCCCCCMYCTGCTGGC
---GCCATCTGTT---
 A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCCCCCMYCTGCTGGC-
--GACCCCCCGCTGTGC
 A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C A C G T
A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCCCCCMYCTGCTGGC
--GACCCCCCGCTGTG
 A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C
A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCCCCMYCTGCTGGC-
--GACCCCCCGCTGCGC
 A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C A C G T
A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCCCCMYCTGCTGGC
--SNGCACCTGCHS--
 A C T G T A G C G A T C A T G C A G T C G T A C G T A C A G T C A G T C C A G T C T A G A T G C C G A T A C T G C T A G A T G C
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T