Information for 4-TGTGTGTGCCATKCNC (Motif 20)

A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C
Reverse Opposite:
A C T G A G C T A C T G T G A C C T G A A C G T A C T G A C T G A G T C C G T A A T G C C G T A A G T C T C G A A G T C C T G A
p-value:1e-6
log p-value:-1.595e+01
Information Content per bp:1.739
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets71.9 +/- 13.1bp
Average Position of motif in Background66.8 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTGCCATKCNC
NNGCGTGTGTGCNGCN---
 A C G T A C G T A C G T A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTGCCATKCNC
TGGGTGTGGC------
 A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTGCCATKCNC
NNNNTTGTGTGCTTNN---
 A C G T A C G T A C G T A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGTGTGTGCCATKCNC
CGTGGGTGGTCC------
 A C G T A C G T A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGTGCCATKCNC
NTGGGTGTGGCC-----
 A C G T A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGTGTGTGCCATKCNC
---CTGTTCCTGG---
 A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTGCCATKCNC
TGGGTGTGGCN-----
 A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGTGTGTGCCATKCNC
TGCGTG----------
 A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTGTGCCATKCNC
RGTGGGYGTGGC------
 A C G T A C G T A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C
C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TGTGTGTGCCATKCNC----
----TCGACCCCGCCCCTAT
 A G C T A C T G A G C T C T A G A C G T A T C G C G A T T A C G A G T C A G T C T G C A A G C T A C T G A G T C C T G A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T