Information for 5-CTCCGGCGTG (Motif 13)

A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G
Reverse Opposite:
A G T C G C T A G T A C A C T G G T A C A G T C C T A G A C T G G T C A T A C G
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.716
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif307.9
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets52.0 +/- 29.8bp
Average Position of motif in Background52.7 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CTCCGGCGTG
----TGCGTG
 A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCCGGCGTG-----
CAAAGGCGTGGCCAG
 A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCCGGCGTG
GCTCCG-----
 A C G T A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTCCGGCGTG-
---GGACGTGC
 A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTCCGGCGTG--
----GGCGCGCT
 A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCCGGCGTG---
---TTGCGTGCVA
 A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0179.1_Sp100_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCCGGCGTG------
-TCCGTCGCTTAAAAG
 A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGCGTG
NRYTTCCGGY---
 A C G T A C G T A C G T A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTCCGGCGTG--
TGGGCGACGTCGTTAA
 A C G T A C G T A C G T A C G T A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G A C G T A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTCCGGCGTG-
---RTACGTGC
 A T G C C A G T T G A C G A T C C T A G C A T G T G A C A C T G C G A T C T A G A C G T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C