Information for 1-CAHATACTAACCATVA (Motif 1)

A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A
Reverse Opposite:
A G C T A C T G C T G A A C G T A C T G A C T G C G A T C G A T T G C A A T C G C A G T T G C A A G C T C A T G A C G T A T C G
p-value:1e-13
log p-value:-3.125e+01
Information Content per bp:1.686
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif9.52%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.5 +/- 22.5bp
Average Position of motif in Background73.3 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAHATACTAACCATVA---
----NNNTAACAATTATAN
 A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CAHATACTAACCATVA
-------GAACAATGG
 A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CAHATACTAACCATVA
-------NAACAAT--
 A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAHATACTAACCATVA
--NTTNAGAACAATTA
 A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A
A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CAHATACTAACCATVA
------NAAACCACAG
 A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAHATACTAACCATVA-------
-AATAAAGAACAATAGAATTTCA
 A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CAHATACTAACCATVA
------VRAACAATGG
 A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAHATACTAACCATVA----
----AATGAACAATGGAATT
 A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CAHATACTAACCATVA---
---TTTAGAACAATAAAAT
 A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CAHATACTAACCATVA-
-------AAACCACAGC
 A T G C C G T A G A T C T C G A A C G T G T C A A T G C A C G T G C T A C G T A A G T C G T A C C G T A A G C T T A G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C