Information for 1-ATMCMAWCTGRCK (Motif 3)

C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T
Reverse Opposite:
G T C A A C T G A G C T A G T C C G T A A C T G C G A T A C G T A C G T A C T G A C T G C G T A A C G T
p-value:1e-10
log p-value:-2.532e+01
Information Content per bp:1.856
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.07%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.4 +/- 24.9bp
Average Position of motif in Background54.8 +/- 42.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATMCMAWCTGRCK--
CGACCAACTGCCGTG
 C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATMCMAWCTGRCK---
CGACCAACTGCCATGC
 C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATMCMAWCTGRCK
---CCAACTGCCA
 C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T
A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ATMCMAWCTGRCK
---CCAACTGCCA
 C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATMCMAWCTGRCK
--GCCATCTGTT-
 C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATMCMAWCTGRCK
--ACCATCTGTT-
 C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATMCMAWCTGRCK--
CCNNACCATCTGGCCTN
 A C G T A C G T C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATMCMAWCTGRCK
--RCCATMTGTT-
 C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T
A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATMCMAWCTGRCK-
--GCCAGCTGBTNB
 C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T A C G T
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----ATMCMAWCTGRCK--
NDBAGATRWTATCTVNNNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T A C A G T C G T C A C G T A C G T A A G T C A C G T A C T G C T G A A G T C C A G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T