Information for 6-STMARCACAKAMY (Motif 12)

T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T
Reverse Opposite:
C T G A A C T G A C G T G T C A A C G T A C T G A C G T A C T G A G T C A C G T A C G T C G T A A T G C
p-value:1e-5
log p-value:-1.257e+01
Information Content per bp:1.826
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.8 +/- 22.8bp
Average Position of motif in Background44.1 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:STMARCACAKAMY
-AAACCACAGC--
 T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:STMARCACAKAMY
GTCAGCANNTN--
 T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:STMARCACAKAMY---
CGAAGCACACAAAATA
 T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:STMARCACAKAMY
NWAACCACADNN-
 T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:STMARCACAKAMY
NAAACCACAG---
 T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---STMARCACAKAMY
AAAGTAAACAAAAATT
 A C G T A C G T A C G T T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

FOXO6/MA0849.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:STMARCACAKAMY
GTAAACA------
 T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T
C T A G C G A T T G C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:STMARCACAKAMY
-AAACCACAGAN-
 T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----STMARCACAKAMY
CAAAAGTAAACAAAG---
 A C G T A C G T A C G T A C G T A C G T T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T

FOXO4/MA0848.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:STMARCACAKAMY
GTAAACA------
 T A C G A C G T G T C A C G T A C T A G A G T C C G T A A G T C C G T A A C G T C G T A G T A C A G C T
T C A G C G A T T G C A G T C A C T G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T