Information for 7-CGACTGGGTG (Motif 13)

A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A G T C A C T G
p-value:1e-3
log p-value:-8.769e+00
Information Content per bp:1.934
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.8 +/- 21.5bp
Average Position of motif in Background39.0 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGACTGGGTG--
TGATTGGCTANN
 A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Klf1/MA0493.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGACTGGGTG-----
----TGGGTGTGGCN
 A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGACTGGGTG-----
---NTGGGTGTGGCC
 A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGACTGGGTG----
----TGGGTGTGGC
 A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGACTGGGTG
TGCGTGGGYG
 A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGACTGGGTG--
NGCGTGGGCGGR
 A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G A C G T A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGACTGGGTG----
--CGTGGGTGGTCC
 A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGACTGGGTG
CCGATTGGCT-
 A C G T A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGACTGGGTG
CTGTCTGG---
 A C G T A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGACTGGGTG
VBSYGTCTGG---
 A C G T A C G T A C G T A G T C A C T G C G T A G T A C A C G T A C T G A C T G C T A G A C G T A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T