Information for 25-CCCATGTCTA (Motif 47)

A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A G T C C G T A A C G T A C T G A C T G A C T G
p-value:1e-3
log p-value:-7.660e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background48.4 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCATGTCTA---
-SCHTGTTTACAT
 A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCCATGTCTA----
----TGTCTAGACG
 A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCATGTCTA---
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCATGTCTA-
---TWGTCTGV
 A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

FOXG1/MA0613.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCCATGTCTA-
---TTGTTTAC
 A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCCATGTCTA-----
ACCGTGACTAATTNN
 A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCATGTCTA------
NNTNNTGTCTGGNNTNG
 A C G T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

FOXD1/MA0031.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCCATGTCTA-
---ATGTTTAC
 A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCATGTCTA-
-NVWTGTTTAC
 A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCATGTCTA
--CCTGTCAA
 A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T C G T A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A