Information for 20-ATGAATGGAC (Motif 44)

C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C G T
p-value:1e-3
log p-value:-8.170e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background53.1 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------ATGAATGGAC
NNTNTCATGAATGT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATGAATGGAC---
ACTATGAATGAATGAT
 A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAATGGAC--
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGAATGGAC---
-TGATTGGCTANN
 C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGAATGGAC
ATGMATATDC
 C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAATGGAC-
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGAATGGAC-------
-NNATTGGACTTTNGNN
 C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATGAATGGAC
TTGATTGN--
 C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGAATGGAC---
GGAGAAAGGTGCGA
 A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATGAATGGAC
TGATTRATGGCY
 A C G T A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C