Information for 19-TTGGGTGACC (Motif 43)

A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A
p-value:1e-3
log p-value:-8.170e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background76.1 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGTGACC
GTGGGGTGAT-
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGTGACC-
GTGGCGTGACNG
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGTGACC
ATGGGGTGAT-
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTGGGTGACC
ATGGGGTGAT-
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TTGGGTGACC-
-----TGACCT
 A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGGGTGACC-------
-NNNNTGACCCGGCGCG
 A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TTGGGTGACC--
----GTGACCTT
 A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TTGGGTGACC---
-----TGACCYCT
 A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTGGGTGACC-
CGTGGGTGGTCC
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TTGGGTGACC---
-----TGACCTYA
 A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A