Information for 11-CCAGCGGGCGCCCGGG (Motif 36)

A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C T G A C T G
p-value:1e-4
log p-value:-9.269e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCAGCGGGCGCCCGGG-
-TTGGGGGCGCCCCTAG
 A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCAGCGGGCGCCCGGG
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCGGGCGCCCGGG
DCHCAGCAGGRGGCC---
 A C G T A C G T A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCAGCGGGCGCCCGGG
----AGCGCGCC----
 A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCGGGCGCCCGGG
DCTCAGCAGG--------
 A C G T A C G T A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCAGCGGGCGCCCGGG-
--ANCGCGCGCCCTTNN
 A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C G T
A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCGGGCGCCCGGG
NCNCAGCGGGGGGTC---
 A C G T A C G T A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCAGCGGGCGCCCGGG
TGGCCACCAGGGGGCGCTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCGGGCGCCCGGG
CACAGCGGGGGGTC---
 A C G T A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCAGCGGGCGCCCGGG
-NCGCGGACGTTG---
 A G T C A G T C C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G A C T G A C T G
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T