Information for 3-AAGGCTACGA (Motif 17)

C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T
p-value:1e-4
log p-value:-9.269e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGGCTACGA
CAAGGHCANV-
 A C G T C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGGCTACGA
AAGGTCAC--
 C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AAGGCTACGA
---GCTCCG-
 C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGGCTACGA-----
ACATGCTACCTAATAC
 A C G T C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGGCTACGA-
AAGGATATNTN
 C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAGGCTACGA
BTCAAGGTCA---
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAGGCTACGA
NTCAAGGTCA---
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAGGCTACGA
TWGTCTGV--
 C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCTACGA------
TTNGGGTACGCCNNANN
 A C G T C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AAGGCTACGA
--NGCTN---
 C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C T G C G T A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T