Information for 22-GTATGCACAGCAT (Motif 34)

A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T
Reverse Opposite:
C G T A A G C T A T C G A T G C A C G T A C T G A C G T A C T G A G T C G T C A C G A T C G T A A G T C
p-value:1e-4
log p-value:-9.752e+00
Information Content per bp:1.933
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.3 +/- 34.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTATGCACAGCAT----
--GAGCACAGCAGGACA
 A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTATGCACAGCAT-
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GTATGCACAGCAT
-----CACAGN--
 A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTATGCACAGCAT
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTATGCACAGCAT
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTATGCACAGCAT----
--CCACACAGCAGGAGA
 A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTATGCACAGCAT----
--CCACACAGCAGGAGA
 A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTATGCACAGCAT----
AATCGCACTGCATTCCG
 A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTATGCACAGCAT-
----DCTCAGCAGG
 A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTATGCACAGCAT
---TGCCCAGNHW
 A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A T C G A T G C C T G A A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A