Information for 5-TGTAACACAC (Motif 22)

C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C
Reverse Opposite:
A T C G G A C T T C A G G A C T T C A G C A G T A G C T T C G A A T G C G C T A
p-value:1e-7
log p-value:-1.750e+01
Information Content per bp:1.644
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif14.73%
Number of Background Sequences with motif2705.0
Percentage of Background Sequences with motif6.97%
Average Position of motif in Targets56.5 +/- 26.3bp
Average Position of motif in Background48.1 +/- 47.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTAACACAC-
AGGTGHCAGACA
 A C G T C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

TBX5/MA0807.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGTAACACAC--
----TCACACCT
 C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTAACACAC--
AGGTGNCAGACAG
 A C G T C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTAACACAC
AATGTATCAAT-
 A C G T A C G T C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTAACACAC------
AGCGGCACACACGCAA
 C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGTAACACAC--
----TCACACCT
 C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGTAACACAC---
--TTTCACACCTN
 C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C A C G T A C G T A C G T
A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGTAACACAC--
----TCACACCT
 C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGTAACACAC--
----TCACACCT
 C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTAACACAC
--TGACTCA-
 C G A T T A C G A G C T T C G A G T C A A G T C C T G A A G T C C T G A T A G C
A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T