Information for 1-YCCRCCCYCTTTCCRC (Motif 2)

A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G C G T A G T C A C G T A A T C G C T A G A C T G A C T G A C T G A G T C A C T G A C T G C T A G
p-value:1e-12
log p-value:-2.968e+01
Information Content per bp:1.889
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif6.56%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.5 +/- 23.4bp
Average Position of motif in Background75.9 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---YCCRCCCYCTTTCCRC
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--YCCRCCCYCTTTCCRC
GCCCCGCCCCCTCCC---
 A C G T A C G T A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--YCCRCCCYCTTTCCRC
GCCCCGCCCCC-------
 A C G T A C G T A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--YCCRCCCYCTTTCCRC
GCTCCGCCCMCY------
 A C G T A C G T A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--YCCRCCCYCTTTCCRC
GCCMCGCCCMCY------
 A C G T A C G T A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----YCCRCCCYCTTTCCRC
NAGCCCCGCCCCCN------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.59
Offset:7
Orientation:forward strand
Alignment:YCCRCCCYCTTTCCRC-
-------ATTTTCCATT
 A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YCCRCCCYCTTTCCRC
CCCCCGCCCCCGCC----
 A C G T A C G T A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YCCRCCCYCTTTCCRC
GCCCCGCCCC--------
 A C G T A C G T A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:YCCRCCCYCTTTCCRC-
-------ATTTTCCATT
 A G T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A T G C A C G T A C G T A C G T A G T C A G T C C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T