p-value: | 1e-6 |
log p-value: | -1.503e+01 |
Information Content per bp: | 1.911 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 6.06% |
Number of Background Sequences with motif | 38.9 |
Percentage of Background Sequences with motif | 0.08% |
Average Position of motif in Targets | 36.3 +/- 7.1bp |
Average Position of motif in Background | 46.0 +/- 23.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0029.1_Hic1_1/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCGGCAGGCA---- NGTAGGTTGGCATNNN |
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Hic1/MA0739.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCGGCAGGCA- --GGTTGGCAT |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCGGCAGGCA---- SCAGYCADGCATGAC |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCGGCAGGCA----- ----AAGGCAAGTGT |
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Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCGGCAGGCA- -TBGCACGCAA |
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HIC2/MA0738.1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCGGCAGGCA- --NGTGGGCAT |
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TFAP2A(var.2)/MA0810.1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCGGCAGGCA TGCCCCCGGGCA |
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E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCGGCAGGCA CWGGCGGGAA |
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THAP1/MA0597.1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCGGCAGGCA TNNGGGCAG--- |
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TFAP2B/MA0811.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCGGCAGGCA TGCCCCAGGGCA |
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