Information for 23-AGCATTATATCAG (Motif 41)

C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G
Reverse Opposite:
A G T C A C G T A C T G C T G A A G C T C G T A G C A T G C T A C G T A A C G T T C A G G A T C G C A T
p-value:1e-8
log p-value:-1.954e+01
Information Content per bp:1.685
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif174.0
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets38.4 +/- 25.9bp
Average Position of motif in Background46.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGCATTATATCAG
---ATTGCATCAT
 C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G
A C G T A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGCATTATATCAG
---ATTGCATCAK
 C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G
A C G T A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGCATTATATCAG
GGCCATAAATCA-
 C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGCATTATATCAG
-GCCATAAATCA-
 C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCATTATATCAG
GGCCATAAATCAC
 C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCATTATATCAG
RGCCATYAATCA-
 C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGCATTATATCAG
--TCATCAATCA-
 C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGCATTATATCAG-
---AATGTATCAAT
 C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G A C G T
A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCATTATATCAG
GGCCATAAATCA-
 C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGCATTATATCAG-
----TTTTATKRGG
 C G T A C T A G A G T C T C G A G C A T C G A T C G T A C G A T T C G A A G C T T G A C C G T A T C A G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G