Information for 4-TCCAAATCAC (Motif 38)

A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C
Reverse Opposite:
A C T G G A C T C A T G T G C A A G C T A C G T G A C T A C T G C T A G C T G A
p-value:1e-8
log p-value:-2.060e+01
Information Content per bp:1.827
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif161.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets44.8 +/- 30.4bp
Average Position of motif in Background45.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:TCCAAATCAC--
--CAAATCACTG
 A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCCAAATCAC----
---AAATCACAGCA
 A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCCAAATCAC----
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCCAAATCAC---
---AAATCACTGC
 A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCAAATCAC
WATGCAAATGAG
 A C G T A C G T A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCCAAATCAC
ATATGCAAAT---
 A C G T A C G T A C G T A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCCAAATCAC
TTATGCAAAT---
 A C G T A C G T A C G T A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCAAATCAC
ATATGCAAATNNN
 A C G T A C G T A C G T A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCCAAATCAC-
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCCAAATCAC-
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C C T G A G T C A C T G A A C G T G T A C C T G A A G T C A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A