Information for 17-GGAACCCCATMCC (Motif 35)

T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C
Reverse Opposite:
A C T G C T A G C A G T G T C A A C G T T A C G A T C G C T A G T C A G A C G T G A C T A G T C A G T C
p-value:1e-9
log p-value:-2.145e+01
Information Content per bp:1.693
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif152.5
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets48.2 +/- 27.0bp
Average Position of motif in Background51.2 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGAACCCCATMCC
GWAAYHTGAKMC-
 T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGAACCCCATMCC
-AAACCACANN--
 T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGAACCCCATMCC
NAAACCACAG---
 T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGAACCCCATMCC
-AAACCGCAAA--
 T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGAACCCCATMCC--
-----CACATTCCAT
 T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGAACCCCATMCC
-AAACCGCAA---
 T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAACCCCATMCC
-AAACCACAGC--
 T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGAACCCCATMCC-
------ACATTCCA
 T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGAACCCCATMCC
NWAACCACADNN-
 T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGAACCCCATMCC
-AAACCACAGAN-
 T C A G C T A G C T G A C G T A A G T C A G T C T A G C A G T C C G T A C A G T G T C A A G T C G T A C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T