Information for 16-AGCCCATTTTTAT (Motif 33)

G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T
Reverse Opposite:
C T G A G C A T C G T A C T G A C G T A T C G A T C G A A C G T C T A G C A T G C T A G G T A C A C G T
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.687
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif217.5
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets52.8 +/- 26.7bp
Average Position of motif in Background50.3 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AGCCCATTTTTAT
NNNTCCATCCCATAANN--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AGCCCATTTTTAT-----
-------TTTTATGGCTN
 G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AGCCCATTTTTAT---
------NTTTTATGAC
 G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AGCCCATTTTTAT---
------NTTTTATTGG
 G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXA13/MA0650.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGCCCATTTTTAT---
------TTTTTATTGG
 G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGCCCATTTTTAT------
---NNANTTTTATTGGNNN
 G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGCCCATTTTTAT-
CCTTGCAATTTTTNN
 A C G T G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AGCCCATTTTTAT----
-------TTTTATTRGN
 G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCCCATTTTTAT---
-TTCTATTTTTAGNNN
 G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AGCCCATTTTTAT---
-------TTTTATTGC
 G T C A C A T G G A T C G T A C A G T C C G T A A G C T A G C T C G A T G A C T A C G T C G T A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C