Information for 15-TAGCSGATTAGAA (Motif 32)

A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A
Reverse Opposite:
A C G T A G C T A T G C A C G T C G T A C G T A A C G T G T A C T A C G C T A G A G T C C G A T C G T A
p-value:1e-9
log p-value:-2.182e+01
Information Content per bp:1.714
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif25.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.3 +/- 22.7bp
Average Position of motif in Background53.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC2/MA0891.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TAGCSGATTAGAA
--GNGGATTAGN-
 A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A
A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TAGCSGATTAGAA
---CGGATTAN--
 A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A
A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TAGCSGATTAGAA
--NNGGATTAGN-
 A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A
A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAGCSGATTAGAA---
TAAACTGATAAGAAGAT
 A C G T A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TAGCSGATTAGAA
---RGGATTAR--
 A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TAGCSGATTAGAA
----GGATTAGC-
 A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

BSX/MA0876.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TAGCSGATTAGAA
---CCAATTAA--
 A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A
A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TAGCSGATTAGAA
AAGAGGATTAG--
 A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TAGCSGATTAGAA
--ACCGATTAG--
 A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A
A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TAGCSGATTAGAA
---NGGATTAA--
 A C G T G C T A C T A G A G T C A T G C C A T G G T C A A C G T C G A T C G T A A T C G C T G A C G T A
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T