Information for 3-TGTGTGRGCACCTGCC (Motif 3)

A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C C T G A A T C G A C T G C G A T C T A G G A T C G A T C G A T C G T C A A T G C C G T A G T A C C G T A
p-value:1e-14
log p-value:-3.297e+01
Information Content per bp:1.761
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 20.5bp
Average Position of motif in Background32.8 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TGTGTGRGCACCTGCC-
-----SNGCACCTGCHS
 A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

HES7/MA0822.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGTGTGRGCACCTGCC-
-----TGGCACGTGCCA
 A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGTGTGRGCACCTGCC
-------NCACCTGTN
 A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGTGTGRGCACCTGCC
------TACACCTGTC
 A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTGTGRGCACCTGCC---
--NNTNCGCACCTGTNGAN
 A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C A C G T A C G T A C G T
A C G T A C G T G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

HES5/MA0821.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TGTGTGRGCACCTGCC-
-----TGGCACGTGCCG
 A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGTGTGRGCACCTGCC
------NNCACCTGNN
 A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGTGTGRGCACCTGCC
------CGCACCTGCT
 A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TGTGTGRGCACCTGCC
------AACACCTGCT
 A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGRGCACCTGCC
NTNTATGTGCACATNNN
 A C G T A C G T A C T G A C G T A T C G A C G T C A T G C T A G C A T G A G T C C G T A A G T C A T G C A G C T C T A G A G T C G T A C
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A